| Episode List: |
| Episode Name | Episode Slots | Disc | Disc Order | Directors | Writers | Synopsis | IMDB | Personal Rating | Misc. |
| The Search: Part 1 | 1 | 1 | 1 | Kim Friedman | Ronald D. Moore | An expedition to the Gamma Quadrant to find "the Founders" ends in disaster. | 7.9 | 7 | 1 |
| The Search: Part 2 | 1 | 1 | 2 | Jonathan Frakes | Ira Steven Behr | The Federation appears to be making far too many concessions for the liking of the crew of Deep Space Nine. | 7.5 | 8 | 2 |
| The House of Quark | 1 | 1 | 3 | Les Landau | Ronald D. Moore | Quark's tall tale lands him in the middle of a Klingon house war. | 7.4 | 7 | 3 |
| Equilibrium | 1 | 1 | 4 | Cliff Bole | René Echevarria | A series of disturbing hallucinations sends Jadzia back home to discover the cause. | 6.6 | 7 | 4 |
| Second Skin | 1 | 2 | 1 | Les Landau | Robert Hewitt Wolfe | Kira is confronted with the possibility that she may be a Cardassian sleeper agent. | 7.1 | 9 | 5 |
| The Abandoned | 1 | 2 | 2 | Avery Brooks | Steve Warnek
D. Thomas Maio | An infant found in the wreckage of a ship answers several questions and questions several answers. | 6.6 | 8 | 6 |
| Civil Defense | 1 | 2 | 3 | Reza Badiyi | Mike Krohn | An old Cardassian security program is triggered and sends the entire station into lock-down. | 7.1 | 7 | 7 |
| Meridian | 1 | 2 | 4 | Jonathan Frakes | Mark Gehred-O'Connell | A planet is discovered to that constantly shifts between planes of reality. | 5.7 | 6 | 8 |
| Defiant | 1 | 3 | 1 | Cliff Bole | Ronald D. Moore | Riker pays a visit to the station though his intentions may not be immediately apparent. | 7.5 | 8 | 9 |
| Fascination | 1 | 3 | 2 | Avery Brooks | Philip LaZebnik | When Lwaxana visits the station, love is in the air. | 6.0 | 7 | 10 |
| Episode Name | Episode Slots | Disc | Disc Order | Directors | Writers | Synopsis | IMDB | Personal Rating | Misc. |
| Past Tense: Part 1 | 1 | 3 | 3 | Reza Badiyi | Robert Hewitt Wolfe | Sisko, Bashir and Dax are lost in a transporter accident that apparently sends them to 21st century Earth. | 7.6 | 7 | 11 |
| Past Tense: Part 2 | 1 | 3 | 4 | Jonathan Frakes | René Echevarria
Ira Steven Behr | Sisko and Bashir find themselves integrally caught up in a major event in Earth's history. | 7.6 | 8 | 12 |
| Life Support | 1 | 4 | 1 | Reza Badiyi | Ronald D. Moore | An accident forces Bashir to take drastic steps to preserve Vedek Bareil's life. | 6.3 | 7 | 13 |
| Heart of Stone | 1 | 4 | 2 | Alexander Singer | Robert Hewitt Wolfe
Ira Steven Behr | Kira is trapped and slowly engulfed in a mysterious crystal formation. | 7.0 | 7 | 14 |
| Destiny | 1 | 4 | 3 | Les Landau | Martin A. Winer
David S. Cohen | A Bajoran prophecy foretells dire consequences resulting from an impending Federation/Cardassian joint venture. | 7.1 | 7 | 15 |
| Prophet Motive | 1 | 4 | 4 | Rene Auberjonois | Robert Hewitt Wolfe
Ira Steven Behr | Quark becomes concerned when the Grand Nagus behaves in a manner unbefitting a Ferengi. | 6.8 | 8 | 16 |
| Visionary | 1 | 5 | 1 | Reza Badiyi | John Shirley | O'Brien starts seeing a short distance into the future. | 6.9 | 7 | 17 |
| Distant Voices | 1 | 5 | 2 | Alexander Singer | Robert Hewitt Wolfe
Ira Steven Behr | An attack in the infirmary leads to a series of mysterious events for Bashir. | 6.8 | 8 | 18 |
| Through the Looking Glass | 1 | 5 | 3 | Winrich Kolbe | Robert Hewitt Wolfe
Ira Steven Behr | Sisko must impersonate himself to gain the loyalty of his late wife. | 7.5 | 7 | 19 |
| Improbable Cause | 1 | 5 | 4 | Avery Brooks | René Echevarria | An attempt on Garak's life sends Odo down a bizarre path in search of an answer. | 8.3 | 8 | 20 |
| Episode Name | Episode Slots | Disc | Disc Order | Directors | Writers | Synopsis | IMDB | Personal Rating | Misc. |
| The Die is Cast | 1 | 6 | 1 | David Livingston | Ronald D. Moore | Garak rejoins his former mentor in an attempt against the Founders. | 8.1 | 9 | 21 |
| Explorers | 1 | 6 | 2 | Cliff Bole | René Echevarria | Sisko and Jake test out an ancient Bajoran ship design. | 6.7 | 7 | 22 |
| Family Business | 1 | 6 | 3 | Rene Auberjonois | Robert Hewitt Wolfe
Ira Steven Behr | When their mother is accused of earning profit, Quark and Rom rush back to Ferenginar. | 7.0 | 7 | 23 |
| Shakaar | 1 | 6 | 4 | Jonathan West | Gordon T. Dawson | A former freedom fighter takes a stand against the Bajoran government. | 6.6 | 7 | 24 |
| Facets | 1 | 7 | 1 | Cliff Bole | René Echevarria | Dax must face the angels and demons of her past in an ancient Trill ceremony. | 6.7 | 8 | 25 |
| The Adversary | 1 | 7 | 2 | Alexander Singer | Robert Hewitt Wolfe
Ira Steven Behr | A war is nearly started when a changeling sabotages a mission on the Defiant. | 7.7 | 9 | 26 |
